1.19
Download the source code here: bcftools-1.19.tar.bz2.(The "Source code" downloads are generated by GitHub and are incomplete as they don't bundle HTSlib and are missing some generated files.)
Changes affecting the whole of bcftools, or multiple commands:
- Filtering expressions can be given a file with list of strings to match, this was previously possible only for the ID column. For example
ID=@file .. selects lines with ID present in the file
INFO/TAG=@file.txt .. selects lines where TAG has a string value listed in the file
INFO/TAG!=@file.txt .. TAG must not have a string value listed in the file
- Allow to query REF,ALT columns directly, for example
-e 'REF="N"'
Changes affecting specific commands:
-
bcftools annotate