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Changelog
PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. This is a comprehensive update to it.
This fixes a bug that caused some last-ALT major alleles in multiallelic variants to not be identified correctly, and makes plink2 error out properly in an incompletely implemented variant-split case (mixed known/provisional REF alleles).