New
SPAdes v4.1.0
Despite our intentions to halt active SPAdes development, here is the new SPAdes 4.1 release.
In this release we made the following changes:
- Reduced RAM consumption in pared-read links distance estimation algorithm (https://github.com/ablab/spades/pull/1425);
- Improved k-mer mapper performance (https://github.com/ablab/spades/pull/1419, used in read-to-graph mapping);
- Reduced RAM consumption in repeat resolving module (https://github.com/ablab/spades/pull/1420);
- PathRacer and BinSPreader now support GFA 1.2 as input (https://github.com/ablab/spades/pull/1405);
- Fixed GFA loading (https://github.com/ablab/spades/pull/1423);
- Minor bug-fixes (thanks to @douglasgscofield https://github.com/ablab/spades/pull/1375 and @bzizou https://github.com/ablab/spades/pull/1314).