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Changelog

stringtie

Transcript assembly and quantification for RNA-Seq

52592C++MIT

Last updated 2 months ago

NewJanuary 7, 2025

v3.0.0 release

Significant improvements in assembly accuracy for both short and long RNAseq reads
StringTie can now better recognize and assemble incompletely processed (nascent) transcripts which are abundant in Total RNA libraries (e.g. Ribo-Zero data)
Addressed -e quantification issues where some transcripts with low coverage were no longer reported in the output (fixing #238, #357)