Overview of changes

• Avoid running out of storage space when running the system tests on the CI
• Bump the minimum github.com/sirupsen/logrus version to 1.9.3 for CVE-2025-65637 or GHSA-4f99-4q7p-p3gh
• Optimize the system tests by avoiding a lot of disk I/O
• Unbreak Podman's and Toolbx's downstream Fedora CI
• Unbreak the toolbox run /etc tests with Bash >= 5.3